Source code for simularium_readdy_models.common.particle_data

#!/usr/bin/env python
# -*- coding: utf-8 -*-

import numpy as np


[docs]class ParticleData: """ Particle data for a monomer """ unique_id = "" type_name = "" position = np.zeros(3) neighbor_ids = [] def __init__(self, unique_id, position, type_name="", neighbor_ids=None): self.unique_id = unique_id self.type_name = type_name self.position = position if neighbor_ids is None: self.neighbor_ids = [] else: self.neighbor_ids = neighbor_ids
[docs] def to_string(self): """ string representation """ return ( f"ParticleData(id={self.unique_id}, type={self.type_name}, " f"position={self.position}, neighbors={self.neighbor_ids})" )
def __iter__(self): yield "type_name", self.type_name yield "position", self.position yield "neighbor_ids", self.neighbor_ids