analysis.compression\_metrics.polymer\_trace
============================================

.. automodule:: subcell_pipeline.analysis.compression_metrics.polymer_trace
   :members:
   :undoc-members:

   
   
   

   
   
   .. rubric:: Functions

   .. autosummary::
   
      fit_pca_to_polymer_trace
      get_2d_polymer_trace
      get_angle_between_vectors
      get_asymmetry_of_peak
      get_average_distance_from_end_to_end_axis
      get_bending_energy_from_trace
      get_chirality
      get_compression_ratio
      get_contour_length_from_trace
      get_end_to_end_axis_distances_and_projections
      get_normalized_tangent_vectors
      get_pca_polymer_trace_projection
      get_sum_bending_energy
      get_third_component_variance
      get_total_fiber_twist
      get_total_fiber_twist_2d
      get_total_fiber_twist_pca
      get_total_fiber_twist_project
      get_twist_angle